Items where Subject is "HIV"

A

Alagarasu, K and Selvaraj, P and Swaminathan, S and Narendran, G and Narayanan, P R (2009) 5′ Regulatory and 3′ Untranslated Region Polymorphisms of Vitamin D Receptor Gene in South Indian HIV and HIV–TB Patients. Journal of Clinical Immunology, 29 (2). pp. 196-204. ISSN 0271-9142; eISSN: 1573-2592

Alagarasu, K and Selvaraj, P and Swaminathan, S and Raghavan, S and Narendran, G and Narayanan, P R (2009) CCR2, MCP-1, SDF-1α & DC-sign gene polymorphisms in HIV-1 infected patients with & without tuberculosis. Indian Journal of Medical Research, 130 (4). pp. 444-450. ISSN Print: 0971-5916; Online: 0975-9174

Aralaguppe, Shambhu G. and Siddik, Abu Bakar and Manickam, Ashokkumar and Ambikan, Anoop T. and Kumar, Milner M. and Fernandes, Sunjay Jude and Amogne, Wondwossen and Bangaruswamy, Dhinoth K. and Hanna, Luke Elizabeth and Sonnerborg, Anders and Neogi, Ujjwal (2016) Multiplexed next-generation sequencing and de novo assembly to obtain near full-length HIV-1 genome from plasma virus. Journal of Virological Methods, 236. pp. 98-104. ISSN 01660934

Ashokkumar, Manickam and Aralaguppe, Shambhu G. and Tripathy, Srikanth P. and Hanna, Luke Elizabeth and Neogi, Ujjwal and Kirchhoff, Frank (2018) Unique Phenotypic Characteristics of Recently Transmitted HIV-1 Subtype C Envelope Glycoprotein gp120: Use of CXCR6 Coreceptor by Transmitted Founder Viruses. Journal of Virology, 92 (9). ISSN 0022-538X

Ashokkumar, Manickam and Nesakumar, Manohar and Cheedarla, Narayaniah and Vidyavijayan, KK and Babu, Hemalatha and Tripathy, Srikanth P. and Hanna, Luke Elizabeth (2017) Molecular Characteristics of the Envelope of Vertically Transmitted HIV-1 Strains from Infants with HIV Infection. AIDS Research and Human Retroviruses, 33 (8). pp. 796-806. ISSN 0889-2229

Ashokkumar, Manickam and Pattabiraman, Sathyamurthi and Tripathy, Srikanth P. and Neogi, Ujjwal and Hanna, Luke Elizabeth (2020) Deep Profiling Identifies Selection of Nonsynonymous Amino Acid Substitutions in HIV-1 Envelope During Early Infection. AIDS Research and Human Retroviruses, 36 (12). pp. 1024-1032. ISSN 0889-2229

Ashokkumar, Manickam and Sonawane, Aanand and Sathiyamani, Balakumaran and Esakialraj L, Bennett Henzeler and Hanna, Luke Elizabeth (2020) An dataset on infectious potential of transmitted/founder (TF) and non-TF (NT) HIV-1 viruses generated from Interferon alpha-treated primary CD4 T cells. Data in brief, 29. p. 105365. ISSN 2352-3409

Ashokkumar, Manickam and Sonawane, Aanand and Sperk, Maike and Tripathy, Srikanth P. and Neogi, Ujjwal and Hanna, Luke Elizabeth (2020) In vitro replicative fitness of early Transmitted founder HIV-1 variants and sensitivity to Interferon alpha. Scientific Reports, 10 (1). ISSN 2045-2322

Ashokkumar, Manickam and Tripathy, Srikanth P. and Hanna, Luke Elizabeth (2016) Variability in V1V2 and PNGs in Pediatric HIV-1 Viral Variants Transmitted Through Vertical Route. AIDS Research and Human Retroviruses, 32 (10-11). pp. 942-943. ISSN 0889-2229

B

Boaz, M J and Hayes, P and Tarragona, T and Seamons, L and Cooper, A and Birungi, J and Kitandwe, P and Semaganda, A and Kaleebu, P and Stevens, G and Anzala, O and Farah, B and Ogola, S and Indangasi, J and Mhlanga, P and Eeden, M V and Thakar, M and Pujari, A and Mishra, S and Goontilleke, N and Moore, S and Mahmoud, A and Sathyamoorthy, P and Mahalingam, J and Narayanan, P R and Ramanathan, V D and Cox, J H and Dally, L and Gill, D K and Gilmour, J (2009) Concordant Proficiency in Measurement of T-Cell Immunity in Human Immunodeficiency Virus Vaccine Clinical Trials by Peripheral Blood Mononuclear Cell and Enzyme-Linked Immunospot Assays in Laboratories from Three Continents. Clinical and Vaccine Immunology, 16 (2). pp. 147-155. ISSN : 1556-6811; eISSN: 1556-679X

D

Damodharan, Subha and Gujar, Ravindra and Pattabiraman, Sathyamurthy and Nesakumar, Manohar and Hanna, Luke Elizabeth and Vadakkuppattu, Ramanathan D and Usha, Ramakrishnan (2013) Expression and immunological characterization of cardamom mosaic virus coat protein displaying HIV gp41 epitopes. Microbiology and Immunology, 57 (5). pp. 374-385. ISSN 03855600

Datta, Rohini and Roy Chowdhury, Rohan and Manjunath, Kavyashree and Hanna, Luke Elizabeth and Varadarajan, Raghavan (2020) A facile method of mapping HIV-1 neutralizing epitopes using chemically masked cysteines and deep sequencing. Proceedings of the National Academy of Sciences, 117 (47). pp. 29584-29594. ISSN 0027-8424

Dinesh, Subramaniam and Menon, Thangam and Hanna, Luke E. and Suresh, V. and Sathuvan, M. and Manikannan, M. (2016) In vitro anti-HIV-1 activity of fucoidan from Sargassum swartzii. International Journal of Biological Macromolecules, 82. pp. 83-88. ISSN 01418130

H

Hanna, Luke Elizabeth and Neogi, Ujjwal and Ranga, Udaykumar and Swaminathan, Soumya and Prasad, Vinayaka R. (2014) Phylogenetic Characterization of Six Full-Length HIV-1 Subtype C Molecular Clones from Three Patients: Identification of Rare Subtype C Strains Containing Two NF-κB Motifs in the Long Terminal Repeat. AIDS Research and Human Retroviruses, 30 (6). pp. 586-591. ISSN 0889-2229

Hanna, Luke Elizabeth and Siromany, Valan Adimai and Annamalai, Madheswaran and Karunaianantham, Ramesh and Swaminathan, Soumya (2015) Challenges in the early diagnosis of HIV infection in infants: Experience from Tamil Nadu, India. Indian Pediatrics, 52 (4). pp. 307-309. ISSN 0019-6061

Hassan, Sameer and Srikakulam, Sanjay Kumar and Chandramohan, Yuvaraj and Thangam, Manonanthini and Muthukumar, Soundharrya and Gayathri Devi, P. K. and Hanna, Luke Elizabeth (2018) Exploring the conformational landscapes of HIV protease structural ensembles using principal component analysis. Proteins: Structure, Function, and Bioinformatics, 86 (9). pp. 990-1000. ISSN 08873585

Hemanth Kumar, A K and Ramachandran, Geetha and Rajasekaran, S and Padmapriyadarshini, C and Narendran, G and Anitha, S and Subramanyam, Sudha and Kumaraswami, V and Swaminathan, Soumya (2009) Pharmacokinetics of lamivudine & stavudine in generic fixed-dose combinations in HIV-1 infected adults in India. Indian Journal of Medical Research, 130 (4). pp. 451-457. ISSN Print: 0971-5916; Online: 0975-9174

K

Karunaianantham, Ramesh and Nesa Kumar, Manohar and Gopalan, Bindu and Haribabu, Hemalatha and Hanna, Luke Elizabeth and Sanjeeva, G N and Reddy, Devarajulu and Shet, Anita and Swaminathan, Soumya and Padmapriyadarsini, Chandrasekaran (2022) Molecular Characterization of the Gene of Vertically Transmitted HIV-1 Strains in Children with Virological Failure. AIDS research and human retroviruses, 38 (6). pp. 491-496. ISSN 1931-8405

Kashi, V P and Jacob, R A and Paul, S and Nayak, Kaustuv and Satish, B and Swaminathan, Soumya and Satish, K S and Ranga, U (2009) HIV-1 Tat-specific IgG antibodies in high-responders target a B-cell epitope in the cysteine-rich domain and block extracellular Tat efficiently. Vaccine, 27 (48). pp. 6739-6747. ISSN 0264-410X

Kumar, T.H. Vignesh and Srinivasan, Sowmiya and Krishnan, Vinoth and Vaidyanathan, Rama and Babu, Kannadasan Anand and Natarajan, Sudhakar and Veerapandian, Murugan (2023) Peptide-based direct electrochemical detection of receptor binding domains of SARS-CoV-2 spike protein in pristine samples. Sensors and Actuators B: Chemical, 377. p. 133052. ISSN 09254005

L

Lessells, Richard J. and Swaminathan, Soumya and Godfrey-Faussett, Peter (2015) HIV treatment cascade in tuberculosis patients. Current Opinion in HIV and AIDS, 10 (6). pp. 439-446. ISSN 1746-630X

M

Manohar Nesakumar, Sathiaseelan and Hemalatha, Haribabu and Vidyavijayan, KK and Lucia Precilla, Karunakaran and Ramesh, Karunaianantham and Murugavel, Kailapuri G. and Tripathy, Srikanth Prasad and Hanna, Luke Elizabeth (2020) Genetic Characterization of Full-Length HIV-2 Long Terminal Repeat Sequences: Identification of Rare Promoter Variants. AIDS Research and Human Retroviruses, 36 (6). pp. 533-538. ISSN 0889-2229

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Navaneethapandian, P. G. D. and Karunaianantham, R. and Subramanyan, S. and Chinnayan, P. and Chandrasekaran, P. and Swaminathan, S. (2012) CD4+ T-Lymphocyte Count/CD8+ T-Lymphocyte Count Ratio: Surrogate for HIV Infection in Infants? Journal of Tropical Pediatrics, 58 (5). pp. 394-397. ISSN 0142-6338

Nusrath Unissa, A and Hassan, Sameer and Hanna, Luke Elizabeth (2014) In silico Analysis of Isoniazid Resistance in Mycobacterium tuberculosis. World Academy of Science Engineering and Technology, 8 (3). pp. 150-156.

Nusrath Unissa, Ameeruddin and Hassan, Sameer and Indira Kumari, Venkatesan and Revathy, Ravi and Hanna, Luke Elizabeth (2016) Insights into RpoB clinical mutants in mediating rifampicin resistance in Mycobacterium tuberculosis. Journal of Molecular Graphics and Modelling, 67. pp. 20-32. ISSN 10933263

P

Poorna Ganga Devi, N and Shenbagavalli, R and Ramesh, K and Nataraja Rathinam, S and Swaminathan, Soumya (2009) Rapid Progression of HIV Infection in Infancy. Indian Pediatrics, 46 (1). pp. 53-56. ISSN : 0019-6061; EISSN: 0974-7559

R

Raghavan, S and Selvaraj, P and Swaminathan, S and Narendran, G (2009) Short Communication: Association of HLA-A*1101 with Resistance and B*4006 with Susceptibility to HIV and HIV-TB: An in Silico Analysis of Promiscuous T Cell Epitopes. AIDS Research and Human Retroviruses, 25 (10). pp. 1023-1028. ISSN Print: 0889-2229; Online: 1931-8405

Rajesh, L and Karunaianandham, R and Narayanan, P R and Swaminathan, Soumya (2009) Antiretroviral Drug-Resistant Mutations at Baseline and at Time of Failure of Antiretroviral Therapy in HIV Type 1-Coinfected TB Patients. AIDS Research and Human Retroviruses, 25 (11). pp. 1179-1185. ISSN Print: 0889-2229; Online: 1931-8405

Ramachandran, Geetha and Hemanth Kumar, A K and Rajasekaran, S and Kumar, P and Ramesh, K and Anitha, S and Narendran, G and Menon, Pradeep and Gomathi, C and Swaminathan, Soumya (2009) CYP2B6 G516T polymorphism but not rifampin coadministration influences steady-state pharmacokinetics of efavirenz in human immunodeficiency virus-infected patients in south India. Antimicrobial Agents and Chemotherapy, 53 (3). pp. 863-868. ISSN : 0066-4804; eISSN: 1098-6596

Ramachandran, Geetha and Ramesh, K and Hemanth Kumar, A K and Jagan, I and Vasantha, M and Padmapriyadarshini, C and Narendran, G and Rajasekaran, S and Swaminathan, Soumya (2009) Association of high T-allele frequency of CYP2B6 G516T polymorphism among ethnic south Indian HIV-infected patients with elevated plasma efavirenz and nevirapine. Journal of Antimicrobial Chemotherapy, 63 (4). pp. 841-843. ISSN : 0305-7453; eISSN: 1460-2091 (Unpublished)

Ramana Rao, P V and Murthy, Madhan Kumar and Basirudeen, S and Sharma, P and Swaminathan, Soumya and Raja, Alamelu (2009) Improved diagnosis of tuberculosis in HIV-positive patients using RD1-encoded antigen CFP-10. International Journal of Infectious Diseases, 13 (5). pp. 613-622. ISSN Print: 1201-9712; Online: 1878-3511

Ramanathan, V D and Kumar, M and Mahalingam, J and Sathyamoorthy, P and Narayanan, P R and Solomon, S and Panicali, D and Chakrabarty, S and Cox, J and Sayeed, E and Ackland, J and Verlinde, C and Voojis, D and Loughran, K and Barin, B and Lombardo, A and Gilmour, J and Stevens, G and Smith, M S and Tarragona-Fiol, T and Hayes, P and Kochhar, S and Excler, J L and Fast, P (2009) A Phase 1 Study to Evaluate the Safety and Immunogenicity of a Recombinant HIV Type 1 Subtype C-Modified Vaccinia Ankara Virus Vaccine Candidate in Indian Volunteers. AIDS Research and Human Retroviruses, 25 (11). pp. 1107-1185. ISSN Print: 0889-2229; Online: 1931-8405

Ramesh Kumar, S and Swaminathan, Soumya and Flanigan, T and Mayer, K H and Niaura, R (2009) HIV & smoking in India. Indian Journal of Medical Research, 130 (July). pp. 15-22. ISSN Print: 0971-5916; Online: 0975-9174

Ravanan, R and Venkatesan, P (2008) Some new approaches for modeling the incubation period of HIV/AIDS epidemic. International Journal of Computer, Mathematical Sciences and Applications, 2 (4). pp. 223-237. ISSN 0973-6786

S

Safren, S A and Thomas, B E and Mimiaga, M J and Chandrasekaran, V and Menon, S and Swaminathan, Soumya and Mayer, K H (2009) Depressive symptoms and human immunodeficiency virus risk behavior among men who have sex with men in Chennai, India. Pathology, Health & Medicine, 14 (6). pp. 705-715. ISSN Print: 1354-8506, Online: 1465-3966

Selvaraj, P and Alagarasu, K and Swaminathan, S and Harishankar, M and Narendran, G (2009) CD209 gene polymorphisms in South Indian HIV and HIV-TB patients. Infection, Genetics and Evolution, 9 (2). pp. 256-262. ISSN : 1567-1348; eISSN: 1567-7257

Soumya, Swaminathan and Deivanayagam, C N and Rajasekaran, S and Venkatesan, P and Menon, P A and Ponnuraja, C and Meenalochani, D (2008) Long term follow up of HIV-infected patients with tuberculosis treated with 6-month intermittent short course chemotherapy. National Medical Journal of India, 21 (1). pp. 3-8. ISSN 0970-258X

Soumya, Swaminathan and Padmapriyadarshini, C and Sukumar, B and Illiyas, S and Ramesh Kumar, S and Triveni, C and Gomathy, P and Beena, T and Minnie, M and Narayanan, P R (2008) Nutritional status of persons with HIV infection, persons with HIV infection and tuberculosis, and HIV-negative individuals from southern India. Clinical Infectious Diseases, 46. pp. 946-949. ISSN Print: 1058-4838; Online: 1537-6591

Subramanyam, S and Hanna, L E and Venkatesan, P and Sankaran, K and Narayanan, P R and Swaminathan, S (2004) HIV Alters Plasma and M. tuberculosis-induced Cytokine Production in Patients with Tuberculosis. Journal of Interferon and Cytokine Research , 24 (2). pp. 101-106. ISSN Print: 1079-9907; Online: 1557-7465

Suhadev, Mohanarani and Nyamathi, A M and Swaminathan, Soumya and Suresh, A\ and Venkatesan, P (2009) Factors Associated with Willingness to Participate in HIV Vaccine Trials among High-Risk Populations in South India. AIDS Research and Human Retroviruses, 25 (2). pp. 217-224. ISSN : 0889-2229; eISSN: 1931-8405

Sundaramurthi, Jagadish Chandrabose and Ashokkumar, Manickam and Swaminathan, Soumya and Hanna, Luke Elizabeth (2017) HLA based selection of epitopes offers a potential window of opportunity for vaccine design against HIV. Vaccine, 35 (42). pp. 5568-5575. ISSN 0264410X

Sundaramurthi, Jagadish Chandrabose and Brindha, S. and Shobitha, S.R. and Swathi, A. and Ramanandan, P. and Hanna, Luke Elizabeth (2012) In silico identification of potential antigenic proteins and promiscuous CTL epitopes in Mycobacterium tuberculosis. Infection, Genetics and Evolution, 12 (6). pp. 1312-1318. ISSN 15671348

Sundaramurthi, Jagadish Chandrabose and Ramanathan, V.D. and Hanna, Luke Elizabeth (2013) HLA-B*27:05-Specific Cytotoxic T Lymphocyte Epitopes in Indian HIV Type 1C. AIDS Research and Human Retroviruses, 29 (1). pp. 47-53. ISSN 0889-2229

Swaminathan, S and Subbaraman, R and Venkatesan, P and Subramanyam, S and Kumar, S R and Mayer, K H and Narayanan, P R (2008) Tuberculin skin test results in HIV-infected patients in India: implications for latent tuberculosis treatment. International Journal of Tuberculosis and Lung Disease, 12 (2). pp. 168-173. ISSN Print: 1027-3719; Online: 1815-7920

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Talaat, KR and Kumarasamy, N and Swaminathan, S and Gopinath, R and Nutman, TB (2008) Filarial/Human Immunodeficiency Virus Coinfection in Urban Southern India. The American Journal of Tropical Medicine and Hygiene, 79 (4). pp. 558-560. ISSN 0002-9637

Talaat, KR and Kumaraswamy, N and Swaminathan, Soumya and Gopinath, R and Nutman, T B (2008) Filarial/Human Immunodeficiency Virus Coinfection in Urban Southern India. America Journal of Tropical Medicine and Hygiene, 79 (4). pp. 558-560. ISSN Print: 0002-9637; Online: 1476-1645

Thomas, B and Mimiaga, M J and Mayer, K H and Johnson, C V and Menon, S and Chandrasekaran, V and Murugesan, P and Swaminathan, Soumya and Safren, S A (2009) HIV Prevention Interventions in Chennai, India: Are Men Who Have Sex with Men Being Reached? AIDS Patient Care and STDs, 23 (11). pp. 981-986. ISSN Print: 1087-2914, Online: 1557-7449

Thomas, B and Nyamathi, A and Swaminathan, Soumya (2009) Impact of HIV/AIDS on Mothers in Southern India: A Qualitative Study. AIDS and Behavior, 13 (5). pp. 989-996. ISSN Print: 1090-7165: Online: 1573-3254

Thomas, B E and Chandra, S and Selvi, K J A and Suriyanarayanan, D and Swaminathan, Soumya (2009) Gender differences in sexual behaviour among people living with HIV in Chennai, India. Indian Journal of Medical Research, 129 (6). pp. 690-694. ISSN Print: 0971-5916; Online: 0975-9174

Thomas, B E and Dewan, P K and Vijay, S and Thomas, A and Chauhan, L S and Vedachalam, C and Vaidyanathan, P and Swaminathan, S (2009) Perceptions of Tuberculosis Patients on Provider- Initiated HIV Testing and Counseling - A Study from South India. PLoS ONE, 4 (12). e8389. ISSN 1932-6203

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Vidyavijayan, K. K. and Cheedarala, Narayanaiah and Babu, Hemalatha and Precilla, Lucia K. and Sathyamurthi, Pattabiraman and Chandrasekaran, Padmapriyadarsini and Murugavel, Kailapuri G. and Swaminathan, Soumya and Tripathy, Srikanth P. and Hanna, Luke Elizabeth (2018) Cross Type Neutralizing Antibodies Detected in a Unique HIV-2 Infected Individual From India. Frontiers in Immunology, 9. ISSN 1664-3224

Vidyavijayan, K.K. and Hassan, Sameer and Precilla, Lucia K. and Ashokkumar, Manickam and Chandrasekeran, Padmapriyadharshini and Swaminathan, Soumya and Hanna, Luke Elizabeth (2017) Biased Nucleotide Composition and Differential Codon Usage Pattern in HIV-1 and HIV-2. AIDS Research and Human Retroviruses, 33 (3). pp. 298-307. ISSN 0889-2229

Vijay, S and Swaminathan, S and Vaidyanathan, P and Thomas, A and Kumar, P and Chiddarwar, S and Thomas, B and Dewan, P K (2009) Feasibility of Provider-Initiated HIV Testing and Counselling of Tuberculosis Patients Under the TB Control Programme in Two Districts of South India. PLoS ONE, 4 (11). e7899. ISSN 1932-6203