Items where Author is "Ashokkumar, Manickam"

Ashokkumar, Manickam and Sonawane, Aanand and Sathiyamani, Balakumaran and Esakialraj L, Bennett Henzeler and Hanna, Luke Elizabeth (2020) An dataset on infectious potential of transmitted/founder (TF) and non-TF (NT) HIV-1 viruses generated from Interferon alpha-treated primary CD4 T cells. Data in brief, 29. p. 105365. ISSN 2352-3409

Ashokkumar, Manickam and Pattabiraman, Sathyamurthi and Tripathy, Srikanth P. and Neogi, Ujjwal and Hanna, Luke Elizabeth (2020) Deep Profiling Identifies Selection of Nonsynonymous Amino Acid Substitutions in HIV-1 Envelope During Early Infection. AIDS Research and Human Retroviruses, 36 (12). pp. 1024-1032. ISSN 0889-2229

Ashokkumar, Manickam and Sonawane, Aanand and Sperk, Maike and Tripathy, Srikanth P. and Neogi, Ujjwal and Hanna, Luke Elizabeth (2020) In vitro replicative fitness of early Transmitted founder HIV-1 variants and sensitivity to Interferon alpha. Scientific Reports, 10 (1). ISSN 2045-2322

Cheedarla, Narayanaiah and Sundaramurthi, Jagadish Chandrabose and Hemalatha, Babu and Anangi, Brahmaiah and Nesakumar, Manohar and Ashokkumar, Manickam and Vidya Vijayan, K.K. and Tripathy, Srikanth Prasad and Swaminathan, Soumya and Vaniambadi, S. Kalyanaraman and Ramanathan, D. Vadakkupattu and Hanna, Luke Elizabeth (2019) Mapping of Neutralizing Antibody Epitopes on the Envelope of Viruses Obtained from Plasma Samples Exhibiting Broad Cross-Clade Neutralization Potential Against HIV-1. AIDS Research and Human Retroviruses, 35 (2). pp. 169-184. ISSN 0889-2229

Aralaguppe, Shambhu G. and Ambikan, Anoop T. and Ashokkumar, Manickam and Kumar, Milner M. and Hanna, Luke Elizabeth and Amogne, Wondwossen and Sönnerborg, Anders and Neogi, Ujjwal (2019) MiDRMpol: A High-Throughput Multiplexed Amplicon Sequencing Workflow to Quantify HIV-1 Drug Resistance Mutations against Protease, Reverse Transcriptase, and Integrase Inhibitors. Viruses, 11 (9). p. 806. ISSN 1999-4915

Ashokkumar, Manickam and Aralaguppe, Shambhu G. and Tripathy, Srikanth P. and Hanna, Luke Elizabeth and Neogi, Ujjwal and Kirchhoff, Frank (2018) Unique Phenotypic Characteristics of Recently Transmitted HIV-1 Subtype C Envelope Glycoprotein gp120: Use of CXCR6 Coreceptor by Transmitted Founder Viruses. Journal of Virology, 92 (9). ISSN 0022-538X

Vidyavijayan, K.K. and Hassan, Sameer and Precilla, Lucia K. and Ashokkumar, Manickam and Chandrasekeran, Padmapriyadharshini and Swaminathan, Soumya and Hanna, Luke Elizabeth (2017) Biased Nucleotide Composition and Differential Codon Usage Pattern in HIV-1 and HIV-2. AIDS Research and Human Retroviruses, 33 (3). pp. 298-307. ISSN 0889-2229

Cheedarla, Narayanaiah and Precilla, K. Lucia and Babu, Hemalatha and Vijayan, K. K. Vidya and Ashokkumar, Manickam and Chandrasekaran, Padmapriyadarsini and Kailasam, Nandagopal and Sundaramurthi, Jagadish Chandrabose and Swaminathan, Soumya and Buddolla, Viswanath and Vaniambadi, S. Kalyanaraman and Ramanathan, V. D. and Hanna, Luke Elizabeth (2017) Broad and potent cross clade neutralizing antibodies with multiple specificities in the plasma of HIV-1 subtype C infected individuals. Scientific Reports, 7 (1). ISSN 2045-2322

Sundaramurthi, Jagadish Chandrabose and Ashokkumar, Manickam and Swaminathan, Soumya and Hanna, Luke Elizabeth (2017) HLA based selection of epitopes offers a potential window of opportunity for vaccine design against HIV. Vaccine, 35 (42). pp. 5568-5575. ISSN 0264410X

Ashokkumar, Manickam and Nesakumar, Manohar and Cheedarla, Narayaniah and Vidyavijayan, KK and Babu, Hemalatha and Tripathy, Srikanth P. and Hanna, Luke Elizabeth (2017) Molecular Characteristics of the Envelope of Vertically Transmitted HIV-1 Strains from Infants with HIV Infection. AIDS Research and Human Retroviruses, 33 (8). pp. 796-806. ISSN 0889-2229

Ashokkumar, Manickam and Tripathy, Srikanth P. and Hanna, Luke Elizabeth (2016) Variability in V1V2 and PNGs in Pediatric HIV-1 Viral Variants Transmitted Through Vertical Route. AIDS Research and Human Retroviruses, 32 (10-11). pp. 942-943. ISSN 0889-2229