Items where Author is "Neogi, Ujjwal"

Mikaeloff, Flora and Svensson Akusjärvi, Sara and Ikomey, George Mondinde and Krishnan, Shuba and Sperk, Maike and Gupta, Soham and Magdaleno, Gustavo Daniel Vega and Escós, Alejandra and Lyonga, Emilia and Okomo, Marie Claire and Tagne, Claude Tayou and Babu, Hemalatha and Lorson, Christian L. and Végvári, Ákos and Banerjea, Akhil C. and Kele, Julianna and Hanna, Luke Elizabeth and Singh, Kamal and de Magalhães, João Pedro and Benfeitas, Rui and Neogi, Ujjwal (2022) Trans cohort metabolic reprogramming towards glutaminolysis in long-term successfully treated HIV-infection. Communications Biology, 5 (1). ISSN 2399-3642

Ashokkumar, Manickam and Pattabiraman, Sathyamurthi and Tripathy, Srikanth P. and Neogi, Ujjwal and Hanna, Luke Elizabeth (2020) Deep Profiling Identifies Selection of Nonsynonymous Amino Acid Substitutions in HIV-1 Envelope During Early Infection. AIDS Research and Human Retroviruses, 36 (12). pp. 1024-1032. ISSN 0889-2229

Ashokkumar, Manickam and Sonawane, Aanand and Sperk, Maike and Tripathy, Srikanth P. and Neogi, Ujjwal and Hanna, Luke Elizabeth (2020) In vitro replicative fitness of early Transmitted founder HIV-1 variants and sensitivity to Interferon alpha. Scientific Reports, 10 (1). ISSN 2045-2322

Aralaguppe, Shambhu G. and Ambikan, Anoop T. and Ashokkumar, Manickam and Kumar, Milner M. and Hanna, Luke Elizabeth and Amogne, Wondwossen and Sönnerborg, Anders and Neogi, Ujjwal (2019) MiDRMpol: A High-Throughput Multiplexed Amplicon Sequencing Workflow to Quantify HIV-1 Drug Resistance Mutations against Protease, Reverse Transcriptase, and Integrase Inhibitors. Viruses, 11 (9). p. 806. ISSN 1999-4915

Babu, Hemalatha and Sperk, Maike and Ambikan, Anoop T. and Rachel, Gladys and Viswanathan, Vinod Kumar and Tripathy, Srikanth P. and Nowak, Piotr and Hanna, Luke Elizabeth and Neogi, Ujjwal (2019) Plasma Metabolic Signature and Abnormalities in HIV-Infected Individuals on Long-Term Successful Antiretroviral Therapy. Metabolites, 9 (10). p. 210. ISSN 2218-1989

Babu, Hemalatha and Ambikan, Anoop T and Gabriel, Erin E and Svensson Akusjärvi, Sara and Palaniappan, Alangudi Natarajan and Sundaraj, Vijila and Mupanni, Naveen Reddy and Sperk, Maike and Cheedarla, Narayanaiah and Sridhar, Rathinam and Tripathy, Srikanth P and Nowak, Piotr and Hanna, Luke Elizabeth and Neogi, Ujjwal (2019) Systemic Inflammation and the Increased Risk of Inflamm-Aging and Age-Associated Diseases in People Living With HIV on Long Term Suppressive Antiretroviral Therapy. Frontiers in immunology, 10. p. 1965. ISSN 1664-3224

Ashokkumar, Manickam and Aralaguppe, Shambhu G. and Tripathy, Srikanth P. and Hanna, Luke Elizabeth and Neogi, Ujjwal and Kirchhoff, Frank (2018) Unique Phenotypic Characteristics of Recently Transmitted HIV-1 Subtype C Envelope Glycoprotein gp120: Use of CXCR6 Coreceptor by Transmitted Founder Viruses. Journal of Virology, 92 (9). ISSN 0022-538X

Aralaguppe, Shambhu G. and Siddik, Abu Bakar and Manickam, Ashokkumar and Ambikan, Anoop T. and Kumar, Milner M. and Fernandes, Sunjay Jude and Amogne, Wondwossen and Bangaruswamy, Dhinoth K. and Hanna, Luke Elizabeth and Sonnerborg, Anders and Neogi, Ujjwal (2016) Multiplexed next-generation sequencing and de novo assembly to obtain near full-length HIV-1 genome from plasma virus. Journal of Virological Methods, 236. pp. 98-104. ISSN 01660934

Hanna, Luke Elizabeth and Neogi, Ujjwal and Ranga, Udaykumar and Swaminathan, Soumya and Prasad, Vinayaka R. (2014) Phylogenetic Characterization of Six Full-Length HIV-1 Subtype C Molecular Clones from Three Patients: Identification of Rare Subtype C Strains Containing Two NF-κB Motifs in the Long Terminal Repeat. AIDS Research and Human Retroviruses, 30 (6). pp. 586-591. ISSN 0889-2229