Items where Author is "Hanna, Luke Elizabeth"

Article

Nesakumar, Manohar and Hanna, Luke Elizabeth and Vetrivel, Umashankar (2023) Next‑Gen Dual Transcriptomics for Adult Extrapulmonary Tuberculosis Biomarkers and Host–Pathogen Interplay in Human Cells: A Strategic Review. Next‑Gen Dual Transcriptomics for Adult Extrapulmonary Tuberculosis Biomarkers and Host–Pathogen Interplay in Human Cells: A Strategic Review.

Selvaraju, Sriram and Velayutham, Banurekha and Rao, Raghuram and Rade, Kiran and Thiruvengadam, Kannan and Asthana, Smita and Balachandar, Rakesh and Bangar, SampadaDipak and Bansal, Avi Kumar and Bhat, Jyothi and Chopra, Vishal and Das, Dasarathi and Dutta, Shanta and Devi, Kangjam Rekha and Dwivedi, Gaurav Raj and Kalliath, Atshad and Laxmaiah, Avula and Madhukar, Manoj and Mahapatra, Amarendra and Mohanty, Suman Sundar and Rangaraju, Chethana and Turuk, Jyotirmayee and Menon, Pradeep A. and Krishnan, Rajendran and Singh, Manjula and Sekar, Krithikaa and Robinson, Aby and Turuk, Alka and Krishnan, Nivethitha N. and Srinivasan, Nivetha and Rexy, Catherine and Suresh, M and Hanna, Luke Elizabeth and Choudhury, Avijit H and Parmar, Malik and Ramachandran, Ranjani and Kumar, Nishant and Joshi, Rajendra Panduranga and Narasimhaiah, Somashekar and Chandrasekaran, Padmapriyadarsini and Khan, A. M. and Panda, Samiran and Bhargava, Balram (2023) Prevalence and factors associated with tuberculosis infection in India. Prevalence and factors associated with tuberculosis infection in India, 16 (1876). pp. 1-8.

Karunaianantham, Ramesh and Nesa Kumar, Manohar and Gopalan, Bindu and Haribabu, Hemalatha and Hanna, Luke Elizabeth and Sanjeeva, G N and Reddy, Devarajulu and Shet, Anita and Swaminathan, Soumya and Padmapriyadarsini, Chandrasekaran (2022) Molecular Characterization of the Gene of Vertically Transmitted HIV-1 Strains in Children with Virological Failure. AIDS research and human retroviruses, 38 (6). pp. 491-496. ISSN 1931-8405

Venkataraman, Aishwarya and Shanmugam, Sivakumar and Balaji, Sarath and Mani, Karthick and Shanmugavel, Ashok Kumar and Muthuramalingam, Kannan and Hissar, Syed and Thiruvengadam, Kannan and Selladurai, Elilarasi and Smuk, Melanie and Hanna, Luke Elizabeth and Prendergast, Andrew J. (2022) Comparison of two mycobacterial strains in performance of the whole blood mycobacterial growth inhibition assay in Indian children. Tuberculosis, 137. p. 102255. ISSN 14729792

Vivekanandan, Sandhya and Vetrivel, Umashankar and Hanna, Luke Elizabeth (2022) Design of human immunodeficiency virus-1 neutralizing peptides targeting CD4-binding site: An integrative computational biologics approach. Frontiers in Medicine, 9. ISSN 2296-858X

Shivakoti, Rupak and Newman, John W. and Hanna, Luke Elizabeth and Queiroz, Artur T.L. and Borkowski, Kamil and Gupte, Akshay N. and Paradkar, Mandar and Satyamurthi, Pattabiraman and Kulkarni, Vandana and Selva, Murugesh and Pradhan, Neeta and Shivakumar, Shri Vijay Bala Yogendra and Natarajan, Saravanan and Karunaianantham, Ramesh and Gupte, Nikhil and Thiruvengadam, Kannan and Fiehn, Oliver and Bharadwaj, Renu and Kagal, Anju and Gaikwad, Sanjay and Sangle, Shashikala and Golub, Jonathan E. and Andrade, Bruno B. and Mave, Vidya and Gupta, Amita and Padmapriyadarsini, Chandrasekaran (2022) Host lipidome and tuberculosis treatment failure. European Respiratory Journal, 59 (1). p. 2004532. ISSN 0903-1936

Kumar, Nathella Pavan and Banurekha, V V and Kumar, C P Girish and Nancy, Arul and Padmapriyadarsini, Chandrasekaran and Shankar, Sakila and Hanna, Luke Elizabeth and Murhekar, Manoj and Devi, K R Uma and Babu, Subash (2022) Inactivated COVID-19 vaccines: durability of Covaxin/BBV152 induced immunity against variants of concern. Journal of Travel Medicine, 29 (6). ISSN 1195-1982

Daniel, Evangeline Ann and Sathiyamani, Balakumaran and Thiruvengadam, Kannan and Vivekanandan, Sandhya and Vembuli, Hemanathan and Hanna, Luke Elizabeth (2022) MicroRNAs as diagnostic biomarkers for Tuberculosis: A systematic review and meta- analysis. Frontiers in Immunology, 13. ISSN 1664-3224

Paradkar, Mandar S and Devaleenal D, Bella and Mvalo, Tisungane and Arenivas, Ana and Thakur, Kiran T and Wolf, Lisa and Nimkar, Smita and Inamdar, Sadaf and Giridharan, Prathiksha and Selladurai, Elilarasi and Kinikar, Aarti and Valvi, Chhaya and Khwaja, Saltanat and Gadama, Daphne and Balaji, Sarath and Yadav Kattagoni, Krishna and Venkatesan, Mythily and Savic, Radojka and Swaminathan, Soumya and Gupta, Amita and Gupte, Nikhil and Mave, Vidya and Dooley, Kelly E and Agiwal, Shivali and Ahire, Rupali and Balasubramanian, Usha and Bendre, Manjushree and Chandane, Jyoti and Chopade, Kavita and Dalimbkar, Shamala and Deshpande, Prasad and Dhage, Rajendra and Ithape, Mahesh and Jadhav, Varsha and Kante, Sonali and Kapre, Pallavi and Khan, Nawshaba and Kulkarni, Vandana and Madewar, Renu and Meshram, Shashibhushan and Muttha, Kunal and Nadgeri, Vaishali and Nagargoje, Arti and Nagraj, Amita and Nijampurkar, Aparna and Onawale, Prerana and Pawar, Namrata and Pawar, Prashant and Pradhan, Neeta and Shaikh, Varsha and Shaikh, Zaheda and Shere, Dhananjay and Wani, Gouri and Kulkarni, Rajesh and Rajput, Uday and Ganesan, Mangalambal and Arasan, Gunasundari and Shankar, Shakila and Mary, S Stella and Karuppaiah, Sureshwari and Pauline, Leema and Karunakaran Pramila, Snegha and Arul, Priyadharshini and Ganesh, Sankar and Hanna, Luke Elizabeth and Ramesh, K and Kannan, M and Vijayakumar, Ruthra and Sivakumar, Surekha S and Devika, K and Radhakrishnan, A and Preethi, A R and Rajkumar, S and Saravanan, N and Ramachandran, Geetha and Hemanth Kumar, A K and Dharman, M and Sudha, V and Hissar, Syed and Nagarajan, Valarmathi and Jennifer, Linda and Supriya, R and Manimegalai, R and Kandan, Santhanam and Maniselvi, Archana and Puspha, Oli and Vaishnavi, S and Selvi, R and Neelakandan, Logeswari and Chiunda, Mary and Chunga, Moreen and Kamanga, Madalo and Kamthunzi, Portia and Kanthiti, Elizabeth and Mbewe, Abineli and Msiska, Emmie and Mumba, Noel and Zifa Phiri, Ian and Palichina, Victor and Sichali, Dorothy and Rexroad, Vivian and Hesseling, Anneke and Gupta, Y K and Phillips, Patrick (2022) Randomized Clinical Trial of High-Dose Rifampicin With or Without Levofloxacin Versus Standard of Care for Pediatric Tuberculous Meningitis: The TBM-KIDS Trial. Clinical Infectious Diseases, 75 (9). pp. 1594-1601. ISSN 1058-4838

Rakshit, Sudeshna and Sunny, Jithin S. and George, Melvin and Hanna, Luke Elizabeth and Leela, K. V. and Sarkar, Koustav (2022) T helper cell-mediated epitranscriptomic regulation via m6A RNA methylation bridges link between coronary artery disease and invasive ductal carcinoma. Journal of Cancer Research and Clinical Oncology, 148 (12). pp. 3421-3436. ISSN 0171-5216

Mikaeloff, Flora and Svensson Akusjärvi, Sara and Ikomey, George Mondinde and Krishnan, Shuba and Sperk, Maike and Gupta, Soham and Magdaleno, Gustavo Daniel Vega and Escós, Alejandra and Lyonga, Emilia and Okomo, Marie Claire and Tagne, Claude Tayou and Babu, Hemalatha and Lorson, Christian L. and Végvári, Ákos and Banerjea, Akhil C. and Kele, Julianna and Hanna, Luke Elizabeth and Singh, Kamal and de Magalhães, João Pedro and Benfeitas, Rui and Neogi, Ujjwal (2022) Trans cohort metabolic reprogramming towards glutaminolysis in long-term successfully treated HIV-infection. Communications Biology, 5 (1). ISSN 2399-3642

Natarajan, Sudhakar and Ranganathan, Mohan and Hanna, Luke Elizabeth and Tripathy, Srikanth (2022) Transcriptional Profiling and Deriving a Seven-Gene Signature That Discriminates Active and Latent Tuberculosis: An Integrative Bioinformatics Approach. Genes, 13 (4). p. 616. ISSN 2073-4425

Venkataraman, Aishwarya and Kumar, Nathella Pavan and Hanna, Luke Elizabeth and Putlibai, Sulochana and Karthick, M and Rajamanikam, Anuradha and Sadasivam, Kalaimaran and Sundaram, Balasubramanian and Babu, Subash (2021) Plasma biomarker profiling of PIMS-TS, COVID-19 and SARS-CoV2 seropositive children – a cross-sectional observational study from southern India. EBioMedicine, 66. p. 103317. ISSN 23523964

Kumar, Nathella Pavan and Venkataraman, Aishwarya and Hanna, Luke Elizabeth and Putlibai, Sulochana and Karthick, M and Rajamanikam, Anuradha and Sadasivam, Kalaimaran and Sundaram, Balasubramanian and Babu, Subash (2021) Systemic Inflammation and Microbial Translocation Are Characteristic Features of SARS-CoV-2-Related Multisystem Inflammatory Syndrome in Children. Open Forum Infectious Diseases, 8 (7). ISSN 2328-8957

Ashokkumar, Manickam and Sonawane, Aanand and Sathiyamani, Balakumaran and Esakialraj L, Bennett Henzeler and Hanna, Luke Elizabeth (2020) An dataset on infectious potential of transmitted/founder (TF) and non-TF (NT) HIV-1 viruses generated from Interferon alpha-treated primary CD4 T cells. Data in brief, 29. p. 105365. ISSN 2352-3409

Ashokkumar, Manickam and Pattabiraman, Sathyamurthi and Tripathy, Srikanth P. and Neogi, Ujjwal and Hanna, Luke Elizabeth (2020) Deep Profiling Identifies Selection of Nonsynonymous Amino Acid Substitutions in HIV-1 Envelope During Early Infection. AIDS Research and Human Retroviruses, 36 (12). pp. 1024-1032. ISSN 0889-2229

Hilda, J Nancy and Dasb, Sulochana and Tripathya, Srikanth P and Hanna, Luke Elizabeth (2020) Editor's choice. Innate Immunity, 26 (4). p. 239. ISSN 1753-4259

Ansari, Aftab A. and Munusamy Ponnan, Sivasankaran and Hayes, Peter and Fernandez, Natalia and Thiruvengadam, Kannan and Pattabiram, Sathyamurthi and Nesakumar, Manohar and Srinivasan, Ashokkumar and Kathirvel, Sujitha and Shankar, Janani and Goyal, Rajat and Singla, Nikhil and Mukherjee, Joyeeta and Chatrath, Shweta and Gilmour, Jill and Subramanyam, Sudha and Prasad Tripathy, Srikanth and Swaminathan, Soumya and Hanna, Luke Elizabeth (2020) Evaluation of antiviral T cell responses and TSCM cells in volunteers enrolled in a phase I HIV-1 subtype C prophylactic vaccine trial in India. PLOS ONE, 15 (2). e0229461. ISSN 1932-6203

Manohar Nesakumar, Sathiaseelan and Hemalatha, Haribabu and Vidyavijayan, KK and Lucia Precilla, Karunakaran and Ramesh, Karunaianantham and Murugavel, Kailapuri G. and Tripathy, Srikanth Prasad and Hanna, Luke Elizabeth (2020) Genetic Characterization of Full-Length HIV-2 Long Terminal Repeat Sequences: Identification of Rare Promoter Variants. AIDS Research and Human Retroviruses, 36 (6). pp. 533-538. ISSN 0889-2229

Subramaniam, Dinesh and Hanna, Luke Elizabeth and Maheshkumar, Kuppusamy and Ponmurugan, Karuppiah and Al-Dhabi, Naif Abdullah and Murugan, P. (2020) Immune stimulatory and anti-HIV-1 potential of extracts derived from marine brown algae Padina tetrastromatica. Journal of Complementary and Integrative Medicine, 17 (2). ISSN 2194-6329

Ashokkumar, Manickam and Sonawane, Aanand and Sperk, Maike and Tripathy, Srikanth P. and Neogi, Ujjwal and Hanna, Luke Elizabeth (2020) In vitro replicative fitness of early Transmitted founder HIV-1 variants and sensitivity to Interferon alpha. Scientific Reports, 10 (1). ISSN 2045-2322

Kathirvel, Sujitha and Mani, Maheswaran and Gopala Krishnan, Gopi Krishnan and Sethumadhavan, Aiswarya and Vijayalakshmi, T. and Ponnan, Sivasankaran Munusamy and Hanna, Luke Elizabeth and Mathaiyan, Manikannan (2020) Molecular characterization of Enterococcus faecalis isolates from urinary tract infection and interaction between Enterococcus faecalis encountered Dendritic and Natural Killer cells. Microbial Pathogenesis, 140. p. 103944. ISSN 08824010

Hilda, J Nancy and Das, Sulochana and Tripathy, Srikanth P and Hanna, Luke Elizabeth (2020) Role of neutrophils in tuberculosis: A bird's eye view. Innate Immunity, 26 (4). pp. 240-247. ISSN 1753-4259

Neyrolles, Olivier and Paradkar, Mandar and Padmapriyadarsini, Chandrasekaran and Jain, Divyashri and Shivakumar, Shri Vijay Bala Yogendra and Thiruvengadam, Kannan and Gupte, Akshay N. and Thomas, Beena and Kinikar, Aarti and Sekar, Krithika and Bharadwaj, Renu and Dolla, Chandra Kumar and Gaikwad, Sanjay and Elilarasi, S. and Lokhande, Rahul and Reddy, Devarajulu and Murali, Lakshmi and Kulkarni, Vandana and Pradhan, Neeta and Hanna, Luke Elizabeth and Pattabiraman, Sathyamurthi and Kohli, Rewa and S., Rani and Suryavanshi, Nishi and B. M., Shrinivasa and Cox, Samyra R. and Selvaraju, Sriram and Gupte, Nikhil and Mave, Vidya and Gupta, Amita and Bollinger, Robert C. (2020) Tuberculosis preventive treatment should be considered for all household contacts of pulmonary tuberculosis patients in India. PLOS ONE, 15 (7). e0236743. ISSN 1932-6203

Datta, Rohini and Roy Chowdhury, Rohan and Manjunath, Kavyashree and Hanna, Luke Elizabeth and Varadarajan, Raghavan (2020) A facile method of mapping HIV-1 neutralizing epitopes using chemically masked cysteines and deep sequencing. Proceedings of the National Academy of Sciences, 117 (47). pp. 29584-29594. ISSN 0027-8424

Swathirajan, Chinnambedu Ravichandran and Nandagopal, Pannerselvam and Vignesh, Ramachandran and Srikrishnan, Aylur Kailasam and Goyal, Rajat and Qureshi, Huma and Saravanan, Shanmugam and Solomon, Sunil Suhas and Hanna, Luke Elizabeth and Sivasankaran, Munusamy Ponnan and Singla, Nikhil and Mukherjee, Joyeeta and Chatrath, Shweta and Kopycinski, Jakub and Murugavel, Kailapuri Gangatharan (2019) Association of circulatory Tfh-like cells with neutralizing antibody responses among chronic HIV-1 subtype C infected long-term nonprogressors and progressors. Pathogens and Disease, 77 (4). ISSN 2049-632X

Neyrolles, Olivier and Mave, Vidya and Chandrasekaran, Padmapriyadarshini and Chavan, Amol and Shivakumar, Shri Vijay Bala Yogendra and Danasekaran, Kavitha and Paradkar, Mandar and Thiruvengadam, Kannan and Kinikar, Aarti and Murali, Lakshmi and Gaikwad, Sanjay and Hanna, Luke Elizabeth and Kulkarni, Vandana and Pattabiraman, Sathyamoorthy and Suryavanshi, Nishi and Thomas, Beena and Kohli, Rewa and Sivaramakrishnan, Gomathi Narayan and Pradhan, Neeta and Bhanu, Brindha and Kagal, Anju and Golub, Jonathan and Gandhi, Neel and Gupte, Akshay and Gupte, Nikhil and Swaminathan, Soumya and Gupta, Amita (2019) Infection free “resisters” among household contacts of adult pulmonary tuberculosis. PLOS ONE, 14 (7). e0218034. ISSN 1932-6203

Cheedarla, Narayanaiah and Sundaramurthi, Jagadish Chandrabose and Hemalatha, Babu and Anangi, Brahmaiah and Nesakumar, Manohar and Ashokkumar, Manickam and Vidya Vijayan, K.K. and Tripathy, Srikanth Prasad and Swaminathan, Soumya and Vaniambadi, S. Kalyanaraman and Ramanathan, D. Vadakkupattu and Hanna, Luke Elizabeth (2019) Mapping of Neutralizing Antibody Epitopes on the Envelope of Viruses Obtained from Plasma Samples Exhibiting Broad Cross-Clade Neutralization Potential Against HIV-1. AIDS Research and Human Retroviruses, 35 (2). pp. 169-184. ISSN 0889-2229

Aralaguppe, Shambhu G. and Ambikan, Anoop T. and Ashokkumar, Manickam and Kumar, Milner M. and Hanna, Luke Elizabeth and Amogne, Wondwossen and Sönnerborg, Anders and Neogi, Ujjwal (2019) MiDRMpol: A High-Throughput Multiplexed Amplicon Sequencing Workflow to Quantify HIV-1 Drug Resistance Mutations against Protease, Reverse Transcriptase, and Integrase Inhibitors. Viruses, 11 (9). p. 806. ISSN 1999-4915

Babu, Hemalatha and Sperk, Maike and Ambikan, Anoop T. and Rachel, Gladys and Viswanathan, Vinod Kumar and Tripathy, Srikanth P. and Nowak, Piotr and Hanna, Luke Elizabeth and Neogi, Ujjwal (2019) Plasma Metabolic Signature and Abnormalities in HIV-Infected Individuals on Long-Term Successful Antiretroviral Therapy. Metabolites, 9 (10). p. 210. ISSN 2218-1989

Saranathan, Rajagopalan and Padmapriyadarsini, Chandrasekaran and Sivaramakrishnan, Gomathi Narayanan and Perumal, Bhavani K. and Kannayan, Silambuchelvi and Joseph, Bency and Gopalan, Narendran and Hanna, Luke Elizabeth (2019) Pulmonary Mycobacterium kyorinense Disease: A Case Report and Review of Literature. Indian Journal of Medical Microbiology, 37 (1). pp. 127-131. ISSN 02550857

Ramachandran, Geetha and Chandrasekaran, Padmapriyadarshini and Gaikwad, Sanjay and Agibothu Kupparam, Hemanth Kumar and Thiruvengadam, Kannan and Gupte, Nikhil and Paradkar, Mandar and Dhanasekaran, Kavitha and Sivaramakrishnan, Gomathi Narayan and Kagal, Anju and Thomas, Beena and Pradhan, Neeta and Kadam, Dileep and Hanna, Luke Elizabeth and Balasubramanian, Usha and Kulkarni, Vandana and Murali, Lakshmi and Golub, Jonathan and Gupte, Akshay and Shivakumar, Shri Vijay Bala Yogendra and Swaminathan, Soumya and Dooley, Kelly E and Gupta, Amita and Mave, Vidya (2019) Subtherapeutic Rifampicin Concentration Is Associated With Unfavorable Tuberculosis Treatment Outcomes. Clinical Infectious Diseases, 70 (7). pp. 1463-1470. ISSN 1058-4838

Babu, Hemalatha and Ambikan, Anoop T and Gabriel, Erin E and Svensson Akusjärvi, Sara and Palaniappan, Alangudi Natarajan and Sundaraj, Vijila and Mupanni, Naveen Reddy and Sperk, Maike and Cheedarla, Narayanaiah and Sridhar, Rathinam and Tripathy, Srikanth P and Nowak, Piotr and Hanna, Luke Elizabeth and Neogi, Ujjwal (2019) Systemic Inflammation and the Increased Risk of Inflamm-Aging and Age-Associated Diseases in People Living With HIV on Long Term Suppressive Antiretroviral Therapy. Frontiers in immunology, 10. p. 1965. ISSN 1664-3224

Gupta, Amita and Pandey, Akhilesh and Mave, Vidya and Andrade, Bruno B and Hanna, Luke Elizabeth and Valvi, Chhaya and Shivakumar, Shri Vijay Bala Yogendra and Pradhan, Neeta and Raja, Remya and Sreenivasamurthy, Sreelakshmi and Balasubramanian, Usha and Kulkarni, Vandana and Kinikar, Aarti and Gupte, Akshay N and Gupte, Nikhil and Queiroz, Artur T L and Fukutani, Kiyoshi F and Paradkar, Mandar and Madugundu, Anil K and Tornheim, Jeffrey A (2019) Transcriptomic Profiles of Confirmed Pediatric Tuberculosis Patients and Household Contacts Identifies Active Tuberculosis, Infection, and Treatment Response Among Indian Children. The Journal of Infectious Diseases, 221 (10). pp. 1647-1658. ISSN 0022-1899

Nesakumar, Manohar and Haribabu, Hemalatha and Cheedarla, Narayanaiah and Karunaianantham, Ramesh and Kailasam, Nandagopal and Sathyamurthi, Pattabiraman and Selvachithiram, Murugesan and Tripathy, Srikanth Prasad and Hanna, Luke Elizabeth (2019) Transmitted HIV-1 Drug Resistance in a Treatment-Naive Cohort of Recently Infected Individuals from Chennai, India. AIDS Research and Human Retroviruses, 35 (8). pp. 775-779. ISSN 0889-2229

Vidyavijayan, K. K. and Cheedarala, Narayanaiah and Babu, Hemalatha and Precilla, Lucia K. and Sathyamurthi, Pattabiraman and Chandrasekaran, Padmapriyadarsini and Murugavel, Kailapuri G. and Swaminathan, Soumya and Tripathy, Srikanth P. and Hanna, Luke Elizabeth (2018) Cross Type Neutralizing Antibodies Detected in a Unique HIV-2 Infected Individual From India. Frontiers in Immunology, 9. ISSN 1664-3224

Cheedarla, Narayanaiah and Hemalatha, Babu and Anangi, Brahmaiah and Muthuramalingam, Kannan and Selvachithiram, Murugesan and Sathyamurthi, Pattabiraman and Kailasam, Nandagopal and Varadarajan, Raghavan and Swaminathan, Soumya and Tripathy, Srikanth Prasad and Vaniambadi, S. Kalyanaraman and Vadakkupattu, D. Ramanathan and Hanna, Luke Elizabeth (2018) Evolution of Neutralization Response in HIV-1 Subtype C-Infected Individuals Exhibiting Broad Cross-Clade Neutralization of HIV-1 Strains. Frontiers in Immunology, 9. ISSN 1664-3224

Hassan, Sameer and Srikakulam, Sanjay Kumar and Chandramohan, Yuvaraj and Thangam, Manonanthini and Muthukumar, Soundharrya and Gayathri Devi, P. K. and Hanna, Luke Elizabeth (2018) Exploring the conformational landscapes of HIV protease structural ensembles using principal component analysis. Proteins: Structure, Function, and Bioinformatics, 86 (9). pp. 990-1000. ISSN 08873585

Harishankar, Murugesan and Ravikrishnan, Harini and Ravishankar, Akshaya and Hanna, Luke Elizabeth and Swaminathan, Soumya and Selvaraj, Paramasivam and Bethunaickan, Ramalingam (2018) IL-10 Promoter -592 Polymorphism may Influence Susceptibility to HIV Infection in South Indian Population. Current HIV Research, 16 (1). pp. 58-63. ISSN 1570162X

Unissa, Ameeruddin Nusrath and Doss C, George Priya and Kumar, Thirumal and Sukumar, Swathi and Lakshmi, Appisetty Ramya and Hanna, Luke Elizabeth (2018) Significance of catalase-peroxidase (KatG) mutations in mediating isoniazid resistance in clinical strains of Mycobacterium tuberculosis. Journal of Global Antimicrobial Resistance, 15. pp. 111-120. ISSN 22137165

Gao, Lei and Chandrasekaran, Padmapriyadarsini and Mave, Vidya and Thiruvengadam, Kannan and Gupte, Nikhil and Shivakumar, Shri Vijay Bala Yogendra and Hanna, Luke Elizabeth and Kulkarni, Vandana and Kadam, Dileep and Dhanasekaran, Kavitha and Paradkar, Mandar and Thomas, Beena and Kohli, Rewa and Dolla, Chandrakumar and Bharadwaj, Renu and Sivaramakrishnan, Gomathi Narayan and Pradhan, Neeta and Gupte, Akshay and Murali, Lakshmi and Valvi, Chhaya and Swaminathan, Soumya and Gupta, Amita (2018) Tuberculin skin test and QuantiFERON-Gold In Tube assay for diagnosis of latent TB infection among household contacts of pulmonary TB patients in high TB burden setting. PLOS ONE, 13 (8). e0199360. ISSN 1932-6203

Ashokkumar, Manickam and Aralaguppe, Shambhu G. and Tripathy, Srikanth P. and Hanna, Luke Elizabeth and Neogi, Ujjwal and Kirchhoff, Frank (2018) Unique Phenotypic Characteristics of Recently Transmitted HIV-1 Subtype C Envelope Glycoprotein gp120: Use of CXCR6 Coreceptor by Transmitted Founder Viruses. Journal of Virology, 92 (9). ISSN 0022-538X

Vidyavijayan, K K and Anangi, Brahmaiah and Banu, Brindha and Thiruvengadam, Kannan and Hassan, Sameer and Hanna, Luke Elizabeth (2017) Differential Codon Usage Pattern of HIV-1 tat Gene in Those with Slower and Faster Rates of Disease Progression. AIDS research and human retroviruses, 33 (9). pp. 900-901. ISSN 1931-8405

Vidyavijayan, K.K. and Hassan, Sameer and Precilla, Lucia K. and Ashokkumar, Manickam and Chandrasekeran, Padmapriyadharshini and Swaminathan, Soumya and Hanna, Luke Elizabeth (2017) Biased Nucleotide Composition and Differential Codon Usage Pattern in HIV-1 and HIV-2. AIDS Research and Human Retroviruses, 33 (3). pp. 298-307. ISSN 0889-2229

Cheedarla, Narayanaiah and Precilla, K. Lucia and Babu, Hemalatha and Vijayan, K. K. Vidya and Ashokkumar, Manickam and Chandrasekaran, Padmapriyadarsini and Kailasam, Nandagopal and Sundaramurthi, Jagadish Chandrabose and Swaminathan, Soumya and Buddolla, Viswanath and Vaniambadi, S. Kalyanaraman and Ramanathan, V. D. and Hanna, Luke Elizabeth (2017) Broad and potent cross clade neutralizing antibodies with multiple specificities in the plasma of HIV-1 subtype C infected individuals. Scientific Reports, 7 (1). ISSN 2045-2322

Sundaramurthi, Jagadish Chandrabose and Ashokkumar, Manickam and Swaminathan, Soumya and Hanna, Luke Elizabeth (2017) HLA based selection of epitopes offers a potential window of opportunity for vaccine design against HIV. Vaccine, 35 (42). pp. 5568-5575. ISSN 0264410X

Krishnamoorthy, Ezhilarasi and Hassan, Sameer and Hanna, Luke Elizabeth and Padmalayam, Indira and Rajaram, Rama and Viswanathan, Vijay (2017) Homology modeling of Homo sapiens lipoic acid synthase: Substrate docking and insights on its binding mode. Journal of Theoretical Biology, 420. pp. 259-266. ISSN 00225193

Ashokkumar, Manickam and Nesakumar, Manohar and Cheedarla, Narayaniah and Vidyavijayan, KK and Babu, Hemalatha and Tripathy, Srikanth P. and Hanna, Luke Elizabeth (2017) Molecular Characteristics of the Envelope of Vertically Transmitted HIV-1 Strains from Infants with HIV Infection. AIDS Research and Human Retroviruses, 33 (8). pp. 796-806. ISSN 0889-2229

Nusrath Unissa, Ameeruddin and Hanna, Luke Elizabeth (2017) Molecular mechanisms of action, resistance, detection to the first-line anti tuberculosis drugs: Rifampicin and pyrazinamide in the post whole genome sequencing era. Tuberculosis, 105. pp. 96-107. ISSN 14729792

Vidya Vijayan, K. K. and Karthigeyan, Krithika Priyadarshini and Tripathi, Srikanth P. and Hanna, Luke Elizabeth (2017) Pathophysiology of CD4+ T-Cell Depletion in HIV-1 and HIV-2 Infections. Frontiers in Immunology, 8. ISSN 1664-3224

Unissa, Ameeruddin Nusrath and Sukumar, Swathi and Hanna, Luke Elizabeth (2017) The Role ofN-Acetyl Transferases on Isoniazid Resistance fromMycobacterium tuberculosisand Human: AnIn SilicoApproach. Tuberculosis and Respiratory Diseases, 80 (3). p. 255. ISSN 1738-3536

Gupte, Akshay and Padmapriyadarsini, Chandrasekaran and Mave, Vidya and Kadam, Dileep and Suryavanshi, Nishi and Shivakumar, Shri Vijay Bala Yogendra and Kohli, Rewa and Gupte, Nikhil and Thiruvengadam, Kannan and Kagal, Anju and Meshram, Sushant and Bharadwaj, Renu and Khadse, Sandhya and Ramachandran, Geetha and Hanna, Luke Elizabeth and Pradhan, Neeta and Gomathy, N S and DeLuca, Andrea and Gupta, Amita and Swaminathan, Soumya (2016) Cohort for Tuberculosis Research by the Indo-US Medical Partnership (CTRIUMPH): protocol for a multicentric prospective observational study. BMJ Open, 6 (2). e010542. ISSN 2044-6055

Saadhali, Shainaba A and Hassan, Sameer and Hanna, Luke Elizabeth and Ranganathan, Uma Devi and Kumar, Vanaja (2016) Homology modeling, substrate docking, and molecular simulation studies of mycobacteriophage Che12 lysin A. Journal of Molecular Modeling, 22 (8). ISSN 1610-2940

Nusrath Unissa, Ameeruddin and Hassan, Sameer and Indira Kumari, Venkatesan and Revathy, Ravi and Hanna, Luke Elizabeth (2016) Insights into RpoB clinical mutants in mediating rifampicin resistance in Mycobacterium tuberculosis. Journal of Molecular Graphics and Modelling, 67. pp. 20-32. ISSN 10933263

Aralaguppe, Shambhu G. and Siddik, Abu Bakar and Manickam, Ashokkumar and Ambikan, Anoop T. and Kumar, Milner M. and Fernandes, Sunjay Jude and Amogne, Wondwossen and Bangaruswamy, Dhinoth K. and Hanna, Luke Elizabeth and Sonnerborg, Anders and Neogi, Ujjwal (2016) Multiplexed next-generation sequencing and de novo assembly to obtain near full-length HIV-1 genome from plasma virus. Journal of Virological Methods, 236. pp. 98-104. ISSN 01660934

Nusrath Unissa, Ameeruddin and Hanna, Luke Elizabeth and Swaminathan, Soumya (2016) A Note on Derivatives of Isoniazid, Rifampicin, and Pyrazinamide Showing Activity Against ResistantMycobacterium tuberculosis. Chemical Biology & Drug Design, 87 (4). pp. 537-550. ISSN 17470277

Unissa, Ameeruddin Nusrath and Subbian, Selvakumar and Hanna, Luke Elizabeth and Selvakumar, Nagamiah (2016) Overview on mechanisms of isoniazid action and resistance in Mycobacterium tuberculosis. Infection, Genetics and Evolution, 45. pp. 474-492. ISSN 15671348

Sundaramurthi, Jagadish Chandrabose and Hanna, Luke Elizabeth and Selvaraju, Sriram and Brindha, Sridharan and Joel Gnanadoss, J. and Vincent, Savariar and Singh, Harpreet and Swaminathan, Soumya (2016) TBDRUGS – Database of drugs for tuberculosis. Tuberculosis, 100. pp. 69-71. ISSN 14729792

Ashokkumar, Manickam and Tripathy, Srikanth P. and Hanna, Luke Elizabeth (2016) Variability in V1V2 and PNGs in Pediatric HIV-1 Viral Variants Transmitted Through Vertical Route. AIDS Research and Human Retroviruses, 32 (10-11). pp. 942-943. ISSN 0889-2229

Hanna, Luke Elizabeth and Siromany, Valan Adimai and Annamalai, Madheswaran and Karunaianantham, Ramesh and Swaminathan, Soumya (2015) Challenges in the early diagnosis of HIV infection in infants: Experience from Tamil Nadu, India. Indian Pediatrics, 52 (4). pp. 307-309. ISSN 0019-6061

Hassan, Sameer and Thangam, Manonanthini and Vasudevan, Praveen and Kumar, G. Ramesh and Unni, Rahul and Devi, P. K. Gayathri and Hanna, Luke Elizabeth (2015) A user-friendly web portal for analyzing conformational changes in structures of Mycobacterium tuberculosis. Journal of Molecular Modeling, 21 (10). ISSN 1610-2940

Kumar, Nathella Pavan and Sridhar, Rathinam and Hanna, Luke Elizabeth and Banurekha, Vaithilingam V. and Jawahar, Mohideen S. and Nutman, Thomas B. and Babu, Subash (2014) Altered CD8+ T cell frequency and function in tuberculous lymphadenitis. Tuberculosis, 94 (5). pp. 482-493. ISSN 14729792

Nusrath Unissa, A and Hassan, Sameer and Hanna, Luke Elizabeth (2014) In silico Analysis of Isoniazid Resistance in Mycobacterium tuberculosis. World Academy of Science Engineering and Technology, 8 (3). pp. 150-156.

Hanna, Luke Elizabeth and Neogi, Ujjwal and Ranga, Udaykumar and Swaminathan, Soumya and Prasad, Vinayaka R. (2014) Phylogenetic Characterization of Six Full-Length HIV-1 Subtype C Molecular Clones from Three Patients: Identification of Rare Subtype C Strains Containing Two NF-κB Motifs in the Long Terminal Repeat. AIDS Research and Human Retroviruses, 30 (6). pp. 586-591. ISSN 0889-2229

Briken, Volker and Parandhaman, Dinesh Kumar and Hanna, Luke Elizabeth and Narayanan, Sujatha (2014) PknE, a Serine/Threonine Protein Kinase of Mycobacterium tuberculosis Initiates Survival Crosstalk That Also Impacts HIV Coinfection. PLoS ONE, 9 (1). e83541. ISSN 1932-6203

Damodharan, Subha and Gujar, Ravindra and Pattabiraman, Sathyamurthy and Nesakumar, Manohar and Hanna, Luke Elizabeth and Vadakkuppattu, Ramanathan D and Usha, Ramakrishnan (2013) Expression and immunological characterization of cardamom mosaic virus coat protein displaying HIV gp41 epitopes. Microbiology and Immunology, 57 (5). pp. 374-385. ISSN 03855600

Sundaramurthi, Jagadish Chandrabose and Ramanathan, V.D. and Hanna, Luke Elizabeth (2013) HLA-B*27:05-Specific Cytotoxic T Lymphocyte Epitopes in Indian HIV Type 1C. AIDS Research and Human Retroviruses, 29 (1). pp. 47-53. ISSN 0889-2229

Hassan, Sameer and Debnath, Abhimita and Mahalingam, Vasantha and Hanna, Luke Elizabeth (2012) Computational structural analysis of proteins of Mycobacterium tuberculosis and a resource for identifying off-targets. Journal of Molecular Modeling, 18 (8). pp. 3993-4004. ISSN 1610-2940

Sundaramurthi, Jagadish Chandrabose and Brindha, S. and Shobitha, S.R. and Swathi, A. and Ramanandan, P. and Hanna, Luke Elizabeth (2012) In silico identification of potential antigenic proteins and promiscuous CTL epitopes in Mycobacterium tuberculosis. Infection, Genetics and Evolution, 12 (6). pp. 1312-1318. ISSN 15671348

Sundaramurthi, Jagadish Chandrabose and Swaminathan, Soumya and Hanna, Luke Elizabeth (2012) Resistance-associated epitopes of HIV-1C—highly probable candidates for a multi-epitope vaccine. Immunogenetics, 64 (10). pp. 767-772. ISSN 0093-7711